Gene Naga_100932g2
February 15, 2015
Summary
| Coordinates: | NG_scf06 (429216-430098) |
| Function: | Complex 1 LYR protein |
Gene expression (RPKM)
| +N (day 3) | 43.479 |
| -N (day 3) | 62.201 |
| +N (day +6) | 43.479 |
| -N (day 6) | 62.201 |
BLAST
| Accession | Description | Bit Score |
| gi|168024109|ref|XP_001764579.1 | predicted protein [Physcomitrella patens subsp. patens] | 93.975 |
| gi|242042317|ref|XP_002468553.1 | hypothetical protein SORBIDRAFT_01g047880 [Sorghum bicolor] | 93.204 |
| gi|115450589|ref|NP_001048895.1 | Os03g0136600 [Oryza sativa Japonica Group] | 92.049 |
| gi|118360513|ref|XP_001013490.1 | hypothetical protein TTHERM_01119550 [Tetrahymena thermophila] | 90.508 |
| gi|357114153|ref|XP_003558865.1 | PREDICTED: uncharacterized protein LOC100843808 [Brachypodium distachyon] | 88.582 |
| gi|219129434|ref|XP_002184894.1 | predicted protein [Phaeodactylum tricornutum CCAP 1055/1] | 88.197 |
| gi|340501909|gb|EGR28639.1 | hypothetical protein IMG5_171220 [Ichthyophthirius multifiliis] | 87.811 |
| gi|326526811|dbj|BAK00794.1 | predicted protein [Hordeum vulgare subsp. vulgare] | 85.885 |
| gi|302760213|ref|XP_002963529.1 | hypothetical protein SELMODRAFT_227363 [Selaginella moellendorffii] | 85.500 |
| gi|302799587|ref|XP_002981552.1 | hypothetical protein SELMODRAFT_114745 [Selaginella moellendorffii] | 85.115 |
| gi|294464871|gb|ADE77941.1 | unknown [Picea sitchensis] | 84.730 |
| gi|294462121|gb|ADE76613.1 | unknown [Picea sitchensis] | 84.730 |
| gi|224061953|ref|XP_002300681.1 | predicted protein [Populus trichocarpa] | 84.345 |
| gi|225459752|ref|XP_002285899.1 | PREDICTED: uncharacterized protein LOC100247165 [Vitis vinifera] | 84.345 |
| gi|307107727|gb|EFN55969.1 | hypothetical protein CHLNCDRAFT_145297 [Chlorella variabilis] | 83.959 |
| gi|255086513|ref|XP_002509223.1 | predicted protein [Micromonas sp. RCC299] | 83.189 |
| gi|299116792|emb|CBN74905.1 | conserved unknown protein [Ectocarpus siliculosus] | 82.419 |
| gi|66814934|ref|XP_641605.1 | hypothetical protein DDB_G0279697 [Dictyostelium discoideum AX4] | 82.419 |
| gi|255555293|ref|XP_002518683.1 | conserved hypothetical protein [Ricinus communis] | 81.263 |
| gi|330796005|ref|XP_003286060.1 | hypothetical protein DICPUDRAFT_86994 [Dictyostelium purpureum] | 79.722 |
Protein informations
| INTERPRO | IPR008011 | Complex 1 LYR protein |
| PFAM | PF05347 |