Gene Naga_100477g3
September 23, 2016
Summary
| Coordinates: | NG_chr03 (1183065-1184172) |
| Function: | atp synthase subunit epsilon |
| ATPase, F1 complex, epsilon subunit, mitochondrial; |
Gene expression (RPKM)
| +N (day 3) | 108.780 |
| -N (day 3) | 91.013 |
| +N (day +6) | 189.591 |
| -N (day 6) | 91.805 |
BLAST
| Accession | Description | Bit Score |
| gi|255071761|ref|XP_002499555.1 | H+-or Na+-translocating f-type, v-type and A-type ATPase superfamily [Micromonas sp. RCC299] | 66.240 |
| gi|348688666|gb|EGZ28480.1 | hypothetical protein PHYSODRAFT_284277 [Phytophthora sojae] | 64.314 |
| gi|298711732|emb|CBJ32778.1 | conserved unknown protein [Ectocarpus siliculosus] | 63.929 |
| gi|147795098|emb|CAN67426.1 | hypothetical protein VITISV_025106 [Vitis vinifera] | 61.233 |
| gi|302764056|ref|XP_002965449.1 | hypothetical protein SELMODRAFT_29765 [Selaginella moellendorffii] | 58.921 |
| gi|325179739|emb|CCA14142.1 | H or Na translocating Ftype putative [Albugo laibachii Nc14] | 58.151 |
| gi|307104481|gb|EFN52734.1 | hypothetical protein CHLNCDRAFT_48298 [Chlorella variabilis] | 56.995 |
| gi|145348505|ref|XP_001418688.1 | F-ATPase family transporter: protons (mitochondrial) [Ostreococcus lucimarinus CCE9901] | 55.840 |
| gi|384249977|gb|EIE23457.1 | hypothetical protein COCSUDRAFT_65925 [Coccomyxa subellipsoidea C-169] | 55.455 |
| gi|242129052|gb|ACS83605.1 | ATP synthase epsilon subunit 1 [Gossypium hirsutum] | 55.069 |
| gi|255552368|ref|XP_002517228.1 | ATP synthase epsilon chain, mitochondrial, putative [Ricinus communis] | 54.684 |
| gi|219126858|ref|XP_002183665.1 | predicted protein [Phaeodactylum tricornutum CCAP 1055/1] | 54.684 |
| gi|15217996|ref|NP_175576.1 | ATP synthase subunit epsilon [Arabidopsis thaliana] | 54.684 |
| gi|297847536|ref|XP_002891649.1 | ATP synthase epsilon chain, mitochondrial [Arabidopsis lyrata subsp. lyrata] | 54.299 |
| gi|357486953|ref|XP_003613764.1 | ATP synthase subunit epsilon [Medicago truncatula] | 54.299 |
| gi|543868|sp|Q06450.2 | ATP5E_IPOBARecName: Full=ATP synthase subunit epsilon, mitochondrial; Short=ATPase subunit epsilon | 54.299 |
| gi|301117922|ref|XP_002906689.1 | H - or Na -translocating F-type, V-type and A-type ATPase (F-ATPase) Superfamily [Phytophthora infestans T30-4] | 54.299 |
| gi|225443282|ref|XP_002274249.1 | PREDICTED: ATP synthase subunit epsilon, mitochondrial isoform 1 [Vitis vinifera] | 54.299 |
| gi|357145350|ref|XP_003573613.1 | PREDICTED: ATP synthase subunit epsilon, mitochondrial-like isoform 1 [Brachypodium distachyon] | 53.529 |
| gi|326493418|dbj|BAJ85170.1 | predicted protein [Hordeum vulgare subsp. vulgare] | 53.143 |
Protein informations
| GENE3D | G3DSA:1.10.1620.20 | |
| GO | GO:0015986 | ATP synthesis coupled proton transport |
| INTERPRO | IPR006721 | ATPase, F1 complex, epsilon subunit, mitochondrial |
| PFAM | PF04627 | |
| SUPERFAMILY | SSF48690 |