N. gaditana B-31

FASTA sequences

• N. gaditana whole genome (scaffolds, chloroplast, mitochondrion)
• N. gaditana plastidial genome (chloroplast)
• N. gaditana mitochondrial genome (mtDNA)
• N. gaditana predicted genes (nucleotidic)
• N. gaditana predicted proteins

Annotation

• N. gaditana genome annotation (GFF)
• N. gaditana metabolic pathways (metacyc)

Families of orthologous proteins

You can find a description of these file format in our blog.

• N. gaditana exclusive proteins in clusters
• N. oceanica exclusive proteins in clusters

Reference: Corteggiani Carpinelli, E. et al. " Chromosome Scale Genome Assembly and Transcriptome Profiling of Nannochloropsis gaditana in Nitrogen Depletion. " Mol Plant (2013).

N. gaditana CCMP526

• N. gaditana CCMP526 whole genome assembly (FASTA)
• N. gaditana CCMP526 genes (FASTA)
• N. gaditana CCMP526 proteins (FASTA)
• N. gaditana CCMP526 genes coordinates (GFF)

Reference: Radakovits, R. et al. " Draft genome sequence and genetic transformation of the oleaginous alga Nannochloropis gaditana." Nat Comms 3, 686 (2012).

N. oceanica CCMP1779

• N. oceanica CCMP1779 whole genome assembly (FASTA)
• N. oceanica CCMP1779 annotation (GFF)

Reference: Vieler, A. et al. "Genome, Functional Gene Annotation, and Nuclear Transformation of the Heterokont Oleaginous Alga Nannochloropsis oceanica CCMP1779." PLoS Genet 8, e1003064 (2012).

N. oceanica

• N. oceanica proteins (FASTA)
• N. oceanica annotation (GFF)

Reference: Pan, K. et al. "Nuclear monoploidy and sexual propagation of Nannochloropsis oceanica (Eustigmatophyceae) as revealed by its genome sequence." Journal of Phycology (2011), 47(6), pp.1425–1432.